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Intel dual port 82599EB cards not getting detected properly

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I have ESXi 5.0 FREE version; works great except this one issue I cannot resolve.

I have 2x Intel NICs, 10GE dual port 82599EB.

 

Issue: only first 1st port of the card is getting detected and available through vSphere client. I checked this by matching the MAC addresses.

 

From ESXi CLI the network list shows 2 1G ports (which is fine), and 2 10G ports (which should be 4)

 

~ # esxcli network nic list
Name    PCI Device     Driver  Link  Speed  Duplex  MAC Address         MTU  Description
------  -------------  ------  ----  -----  ------  -----------------  ----  ----------------------------------------------------------------
vmnic0  0000:002:00.0  ixgbe   Down      0  Half    90:e2:ba:0c:34:c0  1500  Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection
vmnic2  0000:003:00.0  e1000e  Up      100  Full    10:bf:48:00:2a:31  1500  Intel Corporation 82574L Gigabit Network Connection
vmnic3  0000:004:00.0  e1000e  Down      0  Half    10:bf:48:00:2b:a5  1500  Intel Corporation 82574L Gigabit Network Connection
vmnic4  0000:005:00.0  ixgbe   Down      0  Half    90:e2:ba:19:b6:98  1500  Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection

 

 

If I look at PCI list of devices, you shall see all 6 (2x 1G and 4x 10G showing up there).

 

~ # lspci | grep vmnic

000:002:00.0 Network controller: Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection [vmnic0]

000:002:00.1 Network controller: Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection [vmnic1]

000:003:00.0 Network controller: Intel Corporation 82574L Gigabit Network Connection [vmnic2]

000:004:00.0 Network controller: Intel Corporation 82574L Gigabit Network Connection [vmnic3]

000:005:00.0 Network controller: Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection [vmnic4]

000:005:00.1 Network controller: Intel Corporation 82599EB 10-Gigabit SFI/SFP+ Network Connection [vmnic5]

I updated the driver via CLI, using the following VIB file from VMware's site:
Intel_bootbank_net-ixgbe_3.9.13-1OEM.500.0.0.472560.vib
So what is the issue, could someone share? I am a new user to VMware (1 week).
Is it a license (because it is free) issue? Or driver? Or user error?
Appreciate any leads, I am stuck and it is now starting to impact a rollout; it is making VMware look not so cool right now.

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